Publications

Protein language models trained on biophysical dynamics inform mutation effects

Chao Hou, Haiqing Zhao, Yufeng Shen

MotifAE Reveals Functional Sequence Patterns from Protein Language Model: Unsupervised Discovery and Interpretability Analysis

Chao Hou, Di Liu, Yufeng Shen

Understanding Language Model Scaling on Protein Fitness Prediction

Chao Hou, Di Liu, Aziz Zafar, Yufeng Shen

Investigating phase separation properties of chromatin-associated proteins using gradient elution of 1,6-hexanediol

Peiyu Zhu, Chao Hou, Manlin Liu, Taoyu Chen, Tingting Li, Likun Wang

PhaSepDB in 2022: annotating phase separation-related proteins with droplet states, co-phase separation partners and other experimental information

Chao Hou, Xinxin Wang, Haotai Xie, Taoyu Chen, Peiyu Zhu, Xiaofeng Xu, Kaiqiang You, Tingting Li

Systematic prediction of degrons and E3 ubiquitin ligase binding via deep learning

Chao Hou, Yuxuan Li, Mengyao Wang, Hong Wu, Tingting Li

Screening membraneless organelle participants with machine-learning models that integrate multimodal features

Zhaoming Chen, Chao Hou, Liang Wang, Chunyu Yu, Taoyu Chen, Boyan Shen, Yaoyao Hou, Pilong Li, Tingting Li

Serum Antigenome Profiling Reveals Diagnostic Models for Rheumatoid Arthritis

Peng Han, Chao Hou, Xi Zheng, Lulu Cao, Xiaomeng Shi, Xiaohui Zhang, Hua Ye, Hudan Pan, Liang Liu, Tingting Li, Fanlei Hu, Zhanguo Li

MloDisDB: a manually curated database of the relations between membraneless organelles and diseases

Chao Hou, Haotai Xie, Yang Fu, Yao Ma, Tingting Li